YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|189003245, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPVNKRVP KILFILFVVA FCVYLVPRVA INFFYYPDDK IYGPDPWSAE SVEFTAKDGT  60
   61 RLQGWFIPSS TGPADNAIAT IIHAHGNAGN MSAHWPLVSW LPERNFNVFM FDYRGFGKSK 120
  121 GTPSQAGLLD DTQSAINVVR HRSDVNPQRL VLFGQSIGGA NILAVIGQGD REGIRAVILD 180
  181 STFASYATIA NQMIPGSGYL LDESYSGENY IASVSPIPLL LIHGKADHVI PWQHSEKLYS 240
  241 LAKEPKRLIL IPDGEHIDAF SDRHGDVYRE QMVNFILSAL NPQN

Type	Start	End	Confidence
Signal Peptide	1	30	0.58
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	284	0.89