YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YHAI_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWYLSVLKN YVGFSGRARR KEYWMFTLIN AIVGAIINVI QLILGLELPY LSMLYLLATF  60
   61 LPVLALAIRR LHDTDRSGAW ALLFFVPFIG WLVLLVFFCT EGTSGSNRYG NDPKFGSN

Type	Start	End	Confidence
Cytoplasmic	1	22	0.98
Transmembrane Helix	23	44	0.93
Non-Cytoplasmic	45	50	0.79
Transmembrane Helix	51	68	0.96
Cytoplasmic	69	78	0.76
Transmembrane Helix	79	100	0.93
Non-Cytoplasmic	101	118	0.95