YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y1723_PASMU
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYSDFSQQ LKTAGIALSA AELHGFLTGL ICGGIHDQSW QPLLFQFTNE NHAYPTALLQ  60
   61 EVTQIQQHIS KKLADIDGFD FELWLPENED DVFTRADALS EWTNHFLLGL GLAQPKLDKE 120
  121 KGDIGEAIDD LHDICQLGYD ESDDKEELSE ALEEIIEYVR TLACLLFTHF QPQLPEQKPV 180
  181 LH

Type	Start	End	Confidence
Cytoplasmic	1	13	0.49
Transmembrane Helix	14	36	0.51
Non-Cytoplasmic	37	182	0.93