YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YGHE_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHQQHMRNI AQWLQENGIT RATVAPDWMS IPCGFMACDA QRVICRIDEC RGWSAGLALA  60
   61 PVMFRAQLNE QDLPLSLTVV GIAPEKLSAW AGADAERLTV TALPAITTYG EPEGNLLTGP 120
  121 WQPRVSYRKQ WARWRVMILP ILLILVALAV ERGVTLWSVS EQVAQSRTQA EEQFLTLFPE 180
  181 QKRIVNLRSQ VTMALKKYRP QADDTRLLAE LSAIASTLKS ASLSDIEMRG FTFDQKRQIL 240
  241 HLQLRAANFA SFDKLRSVLA TDYVVQQDAL QKEGDAVSGG VTLRRK

Type	Start	End	Confidence
Cytoplasmic	1	133	0.95
Transmembrane Helix	134	155	0.84
Non-Cytoplasmic	156	286	0.98