YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YFGM_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIYENENDQ VEAVKRFFAE NGKALAVGVI LGVGALIGWR YWNSHQVDSA RSASLAYQNA  60
   61 VTAVSEGKPD SIPAAEKFAA ENKNTYGALA SLELAQQFVD KNELEKAAAQ LQQGLADTSD 120
  121 ENLKAVINLR LARVQVQLKQ ADAALKTLDT IKGEGWAAIV ADLRGEALLS KGDKQGARSA 180
  181 WEAGVKSDVT PALSEMMQMK INNLSI

Type	Start	End	Confidence
Cytoplasmic	1	23	0.71
Transmembrane Helix	24	42	0.88
Non-Cytoplasmic	43	206	0.85