YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YFDY_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINLWMFLAL CIVCVSGYIG QVLNVVSAVS SFFGMVILAA LIYYFTMWLT GGNELVTGIF  60
   61 MFLAPACGLM IRFMVGYGRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.44
Transmembrane Helix	5	25	0.71
Cytoplasmic	26	27	0.40
Transmembrane Helix	28	47	0.81
Non-Cytoplasmic	48	54	0.72
Transmembrane Helix	55	76	0.91
Cytoplasmic	77	80	0.85