YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y1588_HELPY
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYKYDRDLE FLKQLESSDL LDLFEVLVFG KDGEKRHNEK LTSSIEYKRH GDDYAKYAER  60
   61 IAEELQYYGS NSFASFIKGE GVLYKEILCD VCDKLKVNYN KKTETTLIEQ NMLSKILERS 120
  121 LEEMDDEEVK EMCDELSIKN TDNLNRQALS AATLTLFKMG GFKSYQLAVI VANAVAKTIL 180
  181 GRGLSLAGNQ VLTRTLSFLT GPVGWIITGV WTAIDIAGPA YRVTIPACIV VATLRLKTQQ 240
  241 ANGDKKSLQI ESI

Type	Start	End	Confidence
Cytoplasmic	1	190	0.57
Transmembrane Helix	191	214	0.56
Non-Cytoplasmic	215	253	0.45