YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y1587_HELPY
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEDLTNSTE YKRYGHDYAK YPRRIAEELQ HYGGNSFANF FRDEGVLYKE ILCDACDHLK  60
   61 VNYNEESATS LIEQNMLSKL LKDSLEKMSR REIKELCNEL GMTNIDKVIG ENKQVLIAST 120
  121 LTLFKAGGSH SYALAVSVAD AMVRQTLGHX ACYVVGKVAL KKTLGVLAGP IGWVITGALV 180
  181 SINLAGPAYR VTVPACVLIA TLRLKLKAK

Type	Start	End	Confidence
Cytoplasmic	1	162	0.76
Transmembrane Helix	163	182	0.71
Non-Cytoplasmic	183	187	0.63
Transmembrane Helix	188	206	0.56
Cytoplasmic	207	209	0.60