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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YEEJ_ECO57
Protein type: Transmembrane
Type Confidence: 0.51
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKKRSGEE INDRQILCGM GIKLRRLTAG ICLITQLVFP MAAAAQGVVN AATQQPVPAQ  60
   61 IAIANANTVP YTLGALESAQ SVAERFGISV AELRKLNQFR TFARGFDNVR QGDELDVPAQ 120
  121 VSENNLTPPP GNSSGNLEQQ IASTSQQIGS LLAEDMNSEQ AANMARGWAS SQASGAMTDW 180
  181 LSRFGTARIT LGVDEDFSLK NSQFDFLHPW YETPDNLFFS QHTLHRTDER TQINNGLGWR 240
  241 HFTPTWMSGI NFFFDHDLSR YHSRAGIGAE YWRDYLKLSS NGYLRLTNWR SAPELDNDYE 300
  301 ARPANGWDVR AEGWLPAWPH LGGKLVYEQY YGDEVALFDK DDRQSNPHAI TAGLNYTPFP 360
  361 LMTFSAEQRQ GKQGENDTRF AVDFTWQPGS AMQKQLDPNE VDARRSLAGS RFDLVDRNNN 420
  421 IVLEYRKKEL VRLTLTDPVT GKSGEVKSLV SSLQTKYALK GYNVEATALE AAGGKVVTTG 480
  481 KDILVTLPAY RFTSTPETDN TWPIEVTAED VKGNFSNREQ SMVVVQAPTL SQKDSSVSLS 540
  541 SQTLSADSHS TATLTFIAHD AAGNPVIGLV LSTRHEGVQD ITLSDWKDNG DGSYTQILTT 600
  601 GAMSGTLTLM PQLNGVDAAK APAVVNIISV SSSRTHSSIK IDKDRYLSGN PIEVTVELRD 660
  661 ENDKPVKEQK QQLNTAVSID NVKPGVTTDW KETADGVYKA TYTAYTKGSG LTAKLLMQNW 720
  721 NEDLHTAGFI IDANPQSAKI ATLSASNNGV LANENAANTV SVNVADEGSN PINDHTVTFA 780
  781 VLSGSATSFN NQNTAKTDVN GLATFDLKSS KQEDNTVEVT LENGVKQTLI VSFVGDSSTA 840
  841 QVDLQKSKNE VVADGNDSAT MTATVRDAKG NLLNDVKVTF NVNSAAAKLS QTEVNSHDGI 900
  901 ATATLTSLKN GDYTVTASVS SGSQANQQVI FIGDQSTAAL TLSVPSGDIT VTNTAPLHMT 960
  961 ATLQDKNGNP LKDKEITFSV PNDVASRFSI SNSGKGMTDS NGTAIASLTG TLAGTHMITA1020
 1021 RLANSNVSDT QPMTFVADKD RAVVVLQTSK AEIIGNGVDE TTLTATVKDP FDNVVKNLSV1080
 1081 VFRTSPADTQ LSLNARNTNE NGIAEVTLKG TVLGVHTAEA ILLNGNRDTK IVNIAPDASN1140
 1141 AQVTLNIPAQ QVVTNNSDSV QLTATVKDPS NHPVAGITVN FTMPQDVAAN FTLENNGIAI1200
 1201 TQANGEAHVT LKGKKAGTHT VTATLGNNNA SDAQPVTFVA DKDSAVVVLQ TSKAEIIGNG1260
 1261 VDETTLTATV KDPFDNAVKD LQVTFSTNPA DTQLSQSKSN TNDSGVAEVT FKGTVLGVHT1320
 1321 AEATLPNGNN DTKIVNIAPD ASNAQVTLNI PAQQVVTNNS DSVQLTATVK DPSNHPVAGI1380
 1381 TVNFTMPQDV AANFTLENNG IAITQANGEA HVTLKGKKAG THTVTATLSN NNTSDSQPVT1440
 1441 FVADKTSALV VLQISKNEIT GNGVDSATLT ATVKDQFDNE VNNLPVTFST ASSGLTLTPG1500
 1501 ESNTNESGIA QATLAGVAFG EQTVTASLAN NGASDNKTVH FIGDTAAAKI IELTPVPDSI1560
 1561 IAGTPQNSSG SVITATVVDN NGFPVKGVTV NFTSNAATAE MTNGGQAVTN EQGKATVTYT1620
 1621 NTRSSIESGA RPDTVEASLE NGSSTLSTSI NVNADASTAH LTLLQALFDT VSAGDTTNLY1680
 1681 IEVKDNYGNG VPQQEVTLSV SPSEGVTPSN NAIYTTNHDG NFYASFTATK AGVYQVTATL1740
 1741 ENGDSMQQTV TYVPNVANAE ISLAASKDPV IANNNDLTTL TATVADTEGN AIANSEVTFT1800
 1801 LPEDVRANFT LGDGGKVVTD TEGKAKVTLK GTKAGAHTVT ASMAGGKSEQ LVVNFIADTL1860
 1861 TAQVNLNVTE DNFIANNVGM TRLQATVTDG NGNPLANEAV TFTLPADVSA SFTLGQGGSA1920
 1921 ITDINGKAEV TLSGTKSGTY PVTVSVNNYG VSDTKQVTLI ADAGTAKLAS LTSVYSFVVS1980
 1981 TTEGATMTAS VTDANGNPVE GIKVNFRGTS VTLSSTSVET DDRGFAEILV TSTEVGLKTV2040
 2041 SASLADKPTE VISRLLNAKA DINSATITSL EIPEGQVMVA QDVAVKAHVN DQFGNPILNE2100
 2101 SVTFSAEPPE HMTISQNIVS TDTHGIAEVT MTPERNGSYM VKASLANGSS YEKDLVVIDQ2160
 2161 KLTLSASSPL IGVNSPTGAT LTATLTSANG TPVEGQVINF SVTPEGATLS GGKVRTNSSG2220
 2221 QAPVVLTSNK VGTYTVTASF HNGVTIQTQT IVKVTGNSST AHVASFIADP STIAATNSDL2280
 2281 STLKATVEDG SGNLIEGLTV YFALKSGSAT LTSLTAVTDQ NGIATTSVRG AITGSVTVSA2340
 2341 VTTAGGMQTV DITLVAGPAD ASQSVLKNNR SSLKGDFTDS AELHLVLHDI SGNPIKVSEG2400
 2401 LEFVQSGTNA PYVQVSAIDY SKNFSGEYKA TVTGGGEGIA TLIPVLNGVH QAGLSTTIQF2460
 2461 TRAEDKIMSG TVLVNGANLP TTTFPSQGFT GAYYQLNNDN FAPGKTAADY EFSSSASWVD2520
 2521 VDATGKVTFK NVGSKWERIT ATPKTGGPSY IYEIRVKSWW VNAGDAFMIY SLAENFCSSN2580
 2581 GYTLPLGDHL NHSRSRGIGS LYSEWGDMGH YTTEAGFHSN MYWSSSPANS NEQYVVSLAT2640
 2641 GDQSVFEKLG FAYATCYKNL 

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