YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MSRP_ECOL6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNQFLKES DVTAESVFFM KRRQVLKALG ISAAAFSLPH AAHADLLSWF KGNDRPPAPA  60
   61 GKPLEFSKPA AWQNNLPLTP ADKVSGYNNF YEFGLDKADP AANAGSLKTD PWTLKISGEV 120
  121 AKPLTLDHDD LTRRFPLEER IYRMRCVEAW SMVVPWIGFP LHKLLALAEP TSNAKYVAFE 180
  181 TIYAPEQMPG QQDRFIGGGL KYPYVEGLRL DEAMHPLTLM TVGVYGKALP PQNGAPVRLI 240
  241 VPWKYGFKGI KSIVSIKLTR ERPPTTWNLV APDEYGFYAN VNPHVDHPRW SQATERFIGS 300
  301 GGILDVQRQP TLLFNGYADQ VASLYRGLDL RENF

Type	Start	End	Confidence
Signal Peptide	1	44	0.94
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	334	0.99