YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDGD_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTTIAVVLG AISLTSAFVF ADKPDVARSA NDEVSTLFFG HDDRVPVNDT TQSPWDAVGQ  60
   61 LETASGNLCT ATLIAPNLAL TAGHCLLTPP KGKADKAVAL RFVSNKGLWR YEIHDIEGRV 120
  121 DPTLGKRLKA DGDGWIVPPA AAPWDFGLIV LRNPPSGITP LPLFEGDKAA LTAALKAAGR 180
  181 KVTQAGYPED HLDTLYSHQN CEVTGWAQTS VMSHQCDTLP GDSGSPLMLH TDDGWQLIGV 240
  241 QSSAPAAKDR WRADNRAISV TGFRDKLDQL SQK

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	273	0.99