YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207857328, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFFFAAAL VVSGLLVGCN QLTQYTISEQ EINQALEKRN NFSKDIGLPG IADAHIVLTN  60
   61 LVSQIGREEP NKVTLTGDAR LDMNSLFGSQ KATMKLKLKA LPVFDKEKGA IYLQEMEVVD 120
  121 ATVTPEKMQS VLQTLLPYLN QSLRSYFNQR PAYVLREDSS KGEALAKKLA KGIEVKPGEI 180
  181 VIPFTN

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	186	0.99