YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGAD_ECO57
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLIITTRQ SPVRLLVDYV ATTILWTLFA LFIFLFAMDL LTGYYWQSEA RSRLQFYFLL  60
   61 AVANAVVLIV WALYNKLRFQ KQQHHAAYQY TPQEYAESLA IPDELYQQLQ KSHRMSVHFT 120
  121 SQGQIKMVVS EKALVRA

Type	Start	End	Confidence
Cytoplasmic	1	15	0.85
Transmembrane Helix	16	38	0.88
Non-Cytoplasmic	39	53	0.79
Transmembrane Helix	54	74	0.94
Cytoplasmic	75	137	0.87