YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lcl\|NC_016856.1_...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGALATFL ALCLPVTVFA TTLRLSNEVD LLVLDGKKVS SSLLRGAESI ELENGPHQLV  60
   61 FRVEKTIRLP GNEERLYISP PLVISFDTQL ISQVNFQLPR LENEREASHF NAAPRLALLD 120
  121 GDAMPIPVKL DILAITSTAK VVDYEIETER YNKSAKRASL PQFATMMADD STLLSDVSEL 180
  181 DTVPPQSQTL TEQRLKYWFR LADPQTRHHF LQWAEKQPPS

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	220	0.99