YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6686347
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.30
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILVMLNTR FFNPYCFQPS SSLCRPSYSL FSGILACISS SKILPFENFF KSTLLGGFFT  60
   61 VVGHSLCRYL SCHYLPSSHR LTGKQRFSHS QSLFPPHPLC FLRRCCYYLL RLGKVTLEGS 120
  121 LWYRPNPLAF FPWKELKDGS FTTSVGSALF DIGDWFGFLS FMSYSCDMPT P

Type	Start	End	Confidence
Cytoplasmic	1	26	0.59
Transmembrane Helix	27	44	0.54
Non-Cytoplasmic	45	52	0.68
Transmembrane Helix	53	72	0.55
Cytoplasmic	73	140	0.59
Transmembrane Helix	141	158	0.30
Non-Cytoplasmic	159	171	0.57