YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|209158675, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWQQRVRVA TGLSCWQIML HLLVVALLVV GWMSKTLVHV GVGLCALYCV TVVMMLVFQR  60
   61 HPEQRWREVA DVLEELTTTW YFGAALIVLW LLSRVLENNF LLAIAGLAIL AGPAVVSLLA 120
  121 KDKKLHHLTS KHRVRR

Type	Start	End	Confidence
Cytoplasmic	1	8	0.96
Transmembrane Helix	9	31	0.89
Non-Cytoplasmic	32	36	0.81
Transmembrane Helix	37	58	0.94
Cytoplasmic	59	75	0.90
Transmembrane Helix	76	93	0.93
Non-Cytoplasmic	94	99	0.80
Transmembrane Helix	100	120	0.95
Cytoplasmic	121	136	0.97