YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YAFU_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSERDLVNF LGDFSMDVAK AVIAGGVATA IGSLASFACV SFGFPVILVG GAILLTGIVC  60
   61 TVVLNEIDAQ CHLSEKLKYA IRDGLKRQQE LDKWKRENMT PFMYVLNTPP VI

Type	Start	End	Confidence
Cytoplasmic	1	17	0.86
Transmembrane Helix	18	39	0.85
Non-Cytoplasmic	40	45	0.57
Transmembrane Helix	46	65	0.88
Cytoplasmic	66	112	0.88