YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YAEI_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISRRRFLQA TAATIATSSG FGYMHYCEPG WFELIRHRLA FFKDNAAPFK ILFLADLHYS  60
   61 RFVPLSLISD AIALGIEQKP DLILLGGDYV LFDMSLNFSA FSDVLSPLAE CAPTFACFGN 120
  121 HDRPVGTEKN HLIGETLKSA GITVLFNQAT VIATPNRQFE LVGTGDLWAG QCKPPPASEA 180
  181 NLPRLVLAHN PDSKEVMRDE PWDLMLCGHT HGGQLRVPLV GEPFAPVEDK RYVAGLNAFG 240
  241 ERHIYTTRGV GSLYGLRLNC RPEVTMLELV

Type	Start	End	Confidence
Signal Peptide	1	22	0.90
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	270	0.99