YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YADN_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKLGFALS GLMLAMVAGT ASADMDGGQL NISGLVVDNT CETRVDGGNK DGLILLQTAT  60
   61 VGEIDAGVLN DTVGAKAKPF SITVDCSKAN PNPGSTAKMT FGSVFFGNSK GTLNNDMSIN 120
  121 NPSDGVNIAL HNIDGSTIKQ VQINNPGDVY TKALDATTKS AVYDFKASYV RAVADQTATA 180
  181 GYVKTNTAYT ITYQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	194	0.99