YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238899416, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNTKLANPA PLGLMGFGMT TILLNLHNVG YFALDGIILA MGIFYGGIAQ IFAGLLEYKK  60
   61 GNTFGLTAFT SYGSFWLTLV AILLMPKLGL TDAPNAQFLG VYLGLWGVFT LFMFFGTLKG 120
  121 ARVLQFVFFS LTVLFALLAI GNIAGNAAII HFAGWIGLIC GASAIYLAMG EVLNEQFGRT 180
  181 VLPIGESH

Type	Start	End	Confidence
Cytoplasmic	1	8	0.83
Transmembrane Helix	9	27	0.89
Non-Cytoplasmic	28	35	0.63
Transmembrane Helix	36	56	0.92
Cytoplasmic	57	63	0.87
Transmembrane Helix	64	85	0.90
Non-Cytoplasmic	86	97	0.73
Transmembrane Helix	98	116	0.96
Cytoplasmic	117	122	0.80
Transmembrane Helix	123	144	0.88
Non-Cytoplasmic	145	148	0.74
Transmembrane Helix	149	170	0.90
Cytoplasmic	171	188	0.92