YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y305_CHLMU
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMQRILVYS DKGVSPYYLR HTVRWLKQAA FPFQMEVCRV NGQFLIHEPL WEETTQLLVI  60
   61 PGGADVPYHH VLHGLGTARI DNYVREGGAY LGICAGAYFG CAHFSFLEPN GSLLVAKRDL 120
  121 GFFPGMANGP AYDSAFSYTS SSGVLAASLR FTDFPGKSFA LFNGGCYFEN AEDFSEVRVE 180
  181 ARYNDLPGSP AAIISRRLDR GLVVLSGPHI EYLPEFCSLQ EENVVHAREQ IAKNSAGLEE 240
  241 YKQTLIKRLL SNVVEHVLY

Type	Start	End	Confidence
Cytoplasmic	1	86	0.52
Transmembrane Helix	87	106	0.50
Non-Cytoplasmic	107	259	0.71