YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WNT5B_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVRMNQGHL LLAVTLIVCN SQLLVVANSW WSLAMNPIQR PEMYIIGAQP LCSQLTGLSQ  60
   61 GQRKLCQLYQ DHMVYIGEGA KTGIKECQYQ FRQRRWNCST VDNTSVFGRV MHIGSRETAF 120
  121 TYAVSAAGVV NAVSRACREG ELSTCGCSRA ARPRDLPRDW LWGGCGDNVN YGYRFAREFV 180
  181 DAREREKNYP RGSVEHARTL MNLQNNEAGR MAVYNLANVA CKCHGVSGSC SLKTCWLQLA 240
  241 DFRRVGEFLK EKYDSAAAMR INRRGKLELV NNRFNPPTGE DLVYIDPSPD YCLRNETTGS 300
  301 LGTQGRLCNK TSEGMDGCEL MCCGRGYDQF KTYKHERCHC KFHWCCYVKC KRCTSLVDQF 360
  361 VCK

Type	Start	End	Confidence
Signal Peptide	1	27	0.54
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	363	0.96