YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WNT11_DANRE
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEYRNFLLL FITSLSVIYP CTGISWLGLT INGSSVGWNQ THHCKLLDGL VPDQQQLCKR  60
   61 NLELMHSIVR AARLTKSACT SSFSDMRWNW SSIESAPHFT PDLAKGTREA AFVVSLAAAV 120
  121 VSHAIARACA SGDLPSCSCA AMPSEQAAPD FRWGGCGDNL RYYGLQMGSA FSDAPMRNRR 180
  181 SGPQDFRLMQ LHNNAVGRQV LMDSLEMKCK CHGVSGSCSV KTCWKGLQDI STISADLKSK 240
  241 YLSATKVIPR QIGTRRQLVP REMEVRPVGE NELVYLVSSP DYCTQNAKQG SLGTTDRQCN 300
  301 KTASGSESCG LMCCGRGYNA YTEVLVERCQ CKYHWCCYVS CKTCKRTVER YVSK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.57
Transmembrane Helix	7	29	0.56
Non-Cytoplasmic	30	354	0.95