YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WFDC1_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRMLSDQR FCRRIFAAAL CVLVLLADSG CARNLWKRAL HLKMTEKYDD YEYPLHSHSA  60
   61 HYQKNDRCPP PPQTLPDRAC EVPSCRSDSE CERHKRCCYN GCIYACLESV QPPPVLDWLV 120
  121 QPKPRWLGGN GWLLDGPEEV LQAEACSTTE DGDEPLHCPT GYECHIINPG NTAEGIPNRG 180
  181 QCIKLRGNPD GRNLRHKYYK EYFGSNSNNV VGYVKNQQKH LG

Type	Start	End	Confidence
Signal Peptide	1	32	0.97
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	222	0.99