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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VPE_CITSI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLASGVLI TLLVALAGIA DGSRDIAGDI LKLPSEAYRF FHNGGGGAKV NDDDDSVGTR  60
   61 WAVLLAGSNG FWNYRHQADI CHAYQLLRKG GLKDENIIVF MYDDIAFNEE NPRPGVIINH 120
  121 PHGDDVYKGV PKDYTGEDVT VEKFFAVVLG NKTALTGGSG KVVDSGPNDH IFIFYSDHGG 180
  181 PGVLGMPTSR YIYADELIDV LKKKHASGNY KSLVFYLEAC ESGSIFEGLL LEGLNIYATT 240
  241 ASNAEESSWG TYCPGEIPGP PPEYSTCLGD LYSIAWMEDS DIHNLRTETL HQQYELVKTR 300
  301 TASYNSYGSH VMQYGDIGLS KNNLFTYLGT NPANDNYTFV DENSLRPASK AVNQRDADLL 360
  361 HFWDKYRKAP EGTPRKAEAQ KQFFEAMSHR MHVDHSIKLI GKLLFGIEKG PEILNTVRPA 420
  421 GQPLVDDWGC LKSLVRTFES HCGALSQYGM KHMRSLANIC NTGIGKEKMA EASAQACENI 480
  481 PSGPWSSLDK GFSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle