YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VIRB5_AGRFC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIMQLVAAA MAVSLLSVGP ARAQFVVSDP ATEAETLATA LETAANLEQT ITMVAMLTSA  60
   61 YGVTGLLTSL NQKNQYPSTR DLDTEMFSPR MPMSTTARAI TTDTDRAVVG GDAEADLLRS 120
  121 QITGSANSAG IAADNLETMD KRLTANAETS TQLSRSRNIM QATVTNGLLL KQIHDAMIQN 180
  181 VQATSLLTMT TAQAGLHEAE EAAAQRKEHQ KTAVIFGAVP

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	220	0.99