YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VGFAA_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLVVYLIQL FLAALLHLSA VKAAHIPKEG GKSKNDVIPF MDVYKKSACK TRELLVDIIQ  60
   61 EYPDEIEHTY IPSCVVLMRC AGCCNDEALE CVPTETRNVT MEVLRVKQRV SQHNFQLSFT 120
  121 EHTKCECRPK AEVKAKKENH CEPCSERRKR LYVQDPLTCK CSCKFTQMQC KSRQLELNER 180
  181 TCRCEKPR

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	188	0.99