YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VEGFA_PIG
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFLLSWVHW SLALLLYLHH AKWSQAAPMA EGDQKPHEVV KFMDVYQRSY CRPIETLVDI  60
   61 FQEYPDEIEY IFKPSCVPLM RCGGCCNDEG LECVPTEEFN ITMQIMRIKP HQGQHIGEMS 120
  121 FLQHNKCECR PKKDRARQEN PCGPCSERRK HLFVQDPQTC KCSCKNTDSR CKARQLELNE 180
  181 RTCRCDKPRR

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	190	0.99