YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VANY_ENTFC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLFFLLLL LFLIYLGYDY VNEALFSQEK VEFQNYDQNP KEHLENSGTS ENTQEKTITE  60
   61 EQVYQGNLLL INSKYPVRQE SVKSDIVNLS KHDELINGYG LLDSNIYMSK EIAQKFSEMV 120
  121 NDAVKGGVSH FIINSGYRDF DEQSVLYQEM GAEYALPAGY SEHNSGLSLD VGSSLTKMER 180
  181 APEGKWIEEN AWKYGFILRY PEDKTELTGI QYEPWHIRYV GLPHSAIMKE KNFVLEEYMD 240
  241 YLKEEKTISV SVNGEKYEIF YYPVTKNTTI HVPTNLRYEI SGNNIDGVIV TVFPGSTHTN 300
  301 SRR

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	303	0.99