YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46132963
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPSCIIIA ITGASASGKS SIASTVHKEL CNELGCQEIG IITEDSYYKD QSHLEMTERV  60
   61 KTNYDHPNSM DRDLLIQHLK NLKNGSAVDV PVYSYVEHTR TNETTHFTPK RIVILEGILL 120
  121 LTDERVRQLA DISVFVDTPL DICFIRRLQR DMEERGRSLQ SVIDQYRATV RPMFLQFIEP 180
  181 SKQYADIVIP RGGKNRIAIN MLKAQILHLL NQK

Type	Start	End	Confidence
Signal Peptide	1	18	0.94
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	213	0.99