YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UCRI_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVAARSGP FAPVLSATSR GVAGALRPLL QSAVPATSEP PVLDVKRPFL CRESLSGQAA  60
   61 TRPLVATVGL NVPASVRYSH TDIKVPDFSD YRRAEVLDST KSSKESSEAR KGFSYLVTAT 120
  121 TTVGVAYAAK NAVSQFVSSM SASADVLAMS KIEIKLSDIP EGKNMAFKWR GKPLFVRHRT 180
  181 KKEIDQEAAV EVSQLRDPQH DLERVKKPEW VILIGVCTHL GCVPIANAGD FGGYYCPCHG 240
  241 SHYDASGRIR KGPAPLNLEV PTYEFTSGDV VVVG

Type	Start	End	Confidence
Signal Peptide	1	24	0.91
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	274	0.99