YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UCRI_LAGLA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPVAALSGP FAPVLSATSR GVXXXXXXXX XXXXXATPEP PVLDPKRPIL SRESLSGQAA  60
   61 RRPLVASVGL NVPASVRYSH TDIKVPDFSD YRRSEVLDKT KSSRESSDAR KGFSYLVTAA 120
  121 TAVGVTYAAK SIVTQFVSSM SASADVLAMS KIEIKLSDIP EGKNMAFKWR GKPLFVRHRT 180
  181 QKEIEQEAAV ELSQLRDPQH DLDRVKKPEW MILIGVCTHL GCVPIANAGD FGGYYCPCHG 240
  241 SHYDASGRIR KGPAPLNLEV PTYEFTGDDM VIVG

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	274	0.98