YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UCRI_CHLAE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVAARSGP FAPVLSATSR GVAGALRPLV QATVPATPEX PVLDLKRPXL SRESLSGQAV  60
   61 RRPLVASVGL NVPASVCYSH TDVKVPDFYD YRRLEVLDST KSSRESSEAR KGFSYLVTAV 120
  121 TTVGVAYAAK NVVTQFISSM SASADVLAMA KIEINLSDIP EGKNMAFKWR GKPLFVRHRT 180
  181 QKEIEEEAAV ELSQLRDPQH DLDRVKKPEW VILIGVCTHL GCVPIANAGD FGGYYCPCHG 240
  241 SHYDASGRIR LGPAPLNLEV PPYEFTGDDV VVVG

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	274	0.97