YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UCRI3_TOBAC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRIAGRKLS SSAATRSSSA FFTRNPFTFT DDSSSPARSP SPASLASQFL DQFRGFSSNS  60
   61 VSPAHQTGLV SDLPATVAAI KNPSSKIVYD DSNHERYPPG DPSKRAFAYF VLTGGRFVYA 120
  121 SLVRLLILKF VLSMSASKDV LALASLEVDL SSIEPGTTVT VKWRGKPVFI RRRTEEDINL 180
  181 ANSVDLGSLR DPQQDAERVK NPEWLVVIGV CTHLGCIPLP NAGDFGGWFC PCHGSHYDIS 240
  241 GRIRKGPAPY NLEVPTYSFM EENKLLIG

Type	Start	End	Confidence
Signal Peptide	1	20	0.82
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.93