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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UBIB_PASMU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIKDISHLY NIIKTFLLYG IDEALPQHRY TRAIRCWRKT LFWLRNQHKD KTFGLRLRLA  60
   61 LQELGPVWIK LGQMLSTRRD LFPPDIADEL ALLQDQVDPF DGKIARAQIE KALGAPLETW 120
  121 FDEFNETALA SASIAQVHTA KFKQNAPHLE NRLAGKEVVL KVLRPNIQQM INADLSLMYK 180
  181 VASWIPRIKA EGRRLRPVEV VREYEKNLRD ELDLRREMAN AIQLRANFEN SPMLYIPEMY 240
  241 KQFCHQTVIV MERIYGIPVS NIEELHANGT NMKLLAERGV QVFFTQVFRD SFFHADMHPG 300
  301 NIFVNRAHPD DPQYIGIDCG IVGRLNDHDK RYLAESFVAF FNRDYRRVAE MHVASGWTPK 360
  361 DTNIDDFEQA FREVCEPIFA KPLSEISFGH VLLNLFNVAR EYNMEVQPQL VLLQKTLLYI 420
  421 EGLGRQLYPQ LDLWDTAKPF LQKWLDEQMG IKAFTKSVKQ KLPYWREHLV DLPENVMDAL 480
  481 AQQKIIADEL IHLNRTLAKK RNIPHFTSFI LGLCTGLAIW LLIYLLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle