YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIM1_NEUCR, U322...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEEISNPL AESGVTISSD SEQYSAPESA SPQSPSSSSP AVVLYQPPTV WSLFRSAVIN  60
   61 LFLPFVNGMM LGFGELFAHE AAFRLGWSNT KVFPVSRRDA RPIGPGVEVV ERPRRRVDLD 120
  121 DHLDELTSLE

Type	Start	End	Confidence
Cytoplasmic	1	56	0.52
Transmembrane Helix	57	78	0.72
Non-Cytoplasmic	79	130	0.69