YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MIM1_ASHGO, U322...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEILGNIA EEAHAALLAS AGDEATKKSG AIRLPIEDSL DGDFGSRGTA YTDLSTTTSA  60
   61 GTSGQLVERT GGISFGRLLS VAGSCSINLL LPFLNGLMLG FGELLAHELS WKFSWFDKER 120
  121 NRGYRIYPEV RKAAELQERE RQRALSRAAG PDGFL

Type	Start	End	Confidence
Cytoplasmic	1	77	0.71
Transmembrane Helix	78	101	0.64
Non-Cytoplasmic	102	155	0.86