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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TREA_SHIFL
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPAPSRPQ KMALIPACIF LCFAALSVQA EETPVTPQPP DILLGPLFND VQNVKLFPDQ  60
   61 KTFADAVPNS DPLMILADYR MQQNQSGFDL RHFVNVNFTL PKEGEKYVPP EGQSLREHID 120
  121 GLWPVLTRST ENTEKWDSLL PLPEPYVVPG GRFREVYYWD NYFTMLGLAE SGHWDKVADM 180
  181 VANFAHEINT YGHIPNGNRS YYLSRSQPPF FALMVELLAQ HEGDAALKQY LPQMQKEYAY 240
  241 WMDGVENLQA GQQEKRVVKL QDSTLLNRYW DDRDTPRPES WVEDIATAKS NPNRPATEIY 300
  301 RDLRSAAASG WDFSSRWMDN PQQLNTLRTT SIVPVDLNSL MFKMEKILAR ASKAAGDNAM 360
  361 ANQYETLANA RQKGIEKYLW NDQQGWYADY DLKSHKVRNQ LTAAALFPLY VNAAAKDRAN 420
  421 KMATATKTHL LQPGGLNTTS VKSGQQWDAP NGWAPLQWVA TEGLQNYGQK EVAMDISWHF 480
  481 LTNVQHTYDR EKKLVEKYDV STTGTGGGGG EYPLQDGFGW TNGVTLKMLD LICPKEQPCD 540
  541 NVPATHPTVK SATTQPSTKE AQPTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle