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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TREA_RABIT
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGSTWELHL LLLLGLGLGS EQALPPPCES QIYCHGELLH QVQMARLYPD DKQFVDMPLS  60
   61 TAPDQVLQSF AELAATYNNT VPREQLEKFV QEHFQAVGQE LESWTPGDWK ESPQFLQKIS 120
  121 DPKLRAWAEQ LHLLWKKLGK KIKPEVLSQP ERFSLIYSQH PFIVPGGRFV EFYYWDSYWV 180
  181 MEGLLLSEMA ETVKGMLQNF LDLVTAYGHI PNGGRVYYLQ RSQPPLLTLM MDRYVAHTGD 240
  241 LAFLRENIET LALELDFWAE NRTISVSSGG NSHTLNRYHV PYGGPRPESY SKDTELAHTL 300
  301 PEGSWETLWA ELKAGAESGW DFSSRWLVGS PNPDSLGSIR TSKLVPVDLN AFLCQAEELL 360
  361 SGFYSRLGNE SQATKYRNLR AQRIAALTAL LWDEDKGAWF DYDLENQKKN HEFYPSNLTP 420
  421 LWAGCFSDPA IADKALQYLQ DSQILNHRHG IPTSLQNTGQ QWDFPNAWAP LQDLVIRGLA 480
  481 KSPSARTQEV AFQLAQNWIR TNFDVYSQRS AMYEKYDISN AQPGGGGEYE VQEGFGWTNG 540
  541 VALMLLDRYG DRLSSGTQLA LLEPHCLAAA LLLSFLTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle