YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TA2R3_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGFIEGVFL VLTITEFILG NLVNGFIVSI NSSYWFKSKK ISLSNFIITS LALFRIFLLW  60
   61 IIFIDSLIIV FSYQTHDSGI MMQLIDVFWT FTNHFSIWLI SCLSVFYCLK IASFSHPSFL 120
  121 WLKWRASRVV VGMLWGALLL SCVSTMSLMN EFKIYSALTR SKDTPNMTEY IRLKRQEYNL 180
  181 MHVLGNLWKI PSLIVSLVAY LLLLLSLGKH TQQMQQYSID SRDQSAEAHK RAMRIISSFL 240
  241 LFFLFYFLSF MILSSSRFLP ETRIARIIGV VISMSYLVGD SFILIVCNNK LKHTFVAMLP 300
  301 CECGHLKPGS KGPSAS

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.94
Transmembrane Helix	8	30	0.84
Cytoplasmic	31	50	0.72
Transmembrane Helix	51	73	0.83
Non-Cytoplasmic	74	90	0.90
Transmembrane Helix	91	111	0.88
Cytoplasmic	112	128	0.81
Transmembrane Helix	129	149	0.93
Non-Cytoplasmic	150	186	0.98
Transmembrane Helix	187	208	0.89
Cytoplasmic	209	234	0.90
Transmembrane Helix	235	254	0.92
Non-Cytoplasmic	255	263	0.80
Transmembrane Helix	264	287	0.81
Cytoplasmic	288	316	0.88