YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TORD_SHEON
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNVDINHAR ALVYQLLSSL FAREVNAQRL QELTSDAAQQ FWTQLGHEPE FSAPVATMQK  60
   61 VLNDLQRNDA LLELAADYCG LFLVGTRHSA SPYASLYLNS EDEPLLFGQQ HQQMSEFLHQ 120
  121 SKLQVQSHFP EPADHLAVML AYMGHLACHS EDAAQLNFLD ACIDSWLAKF VVKVVECDSK 180
  181 HRNGFYSALA SLTLAWVKQD KQLLEQTINS SVEQTLS

Type	Start	End	Confidence
Signal Peptide	1	27	0.57
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	217	0.99