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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TORA_VIBVY
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITRRSFLK GVATTSAASV IGPSLLASAS ANAVETTGTW KVSGSHWGAF RAHIYAGKVQ  60
   61 EIKPIELDQN PTEMLNGIKG IIYSPSRVRY PMVRLDWLKK HKYSADTRGN NRFVRVTWDE 120
  121 ALDLFYRELE RVQKEYGPWA LHAGQTGWNQ TGSFNNCTAH MQRAVGMHGN YITKVGDYST 180
  181 GAGQTILPYV LGSTEVYAQG TSWSEILENA DNIILWANDP VKNLQVGWNC ETHESYAYLA 240
  241 QLKEKVAKGE INVISVDPVK NKTQRYLEND HLYVNPMTDV PFMLAIAHVL YTENLYDKKF 300
  301 IETYCLGFEE FINYVQGKTK DKVEKTPEWA APICGVKADK IREFARMLVK GRTQILMGWC 360
  361 IQRQEHGEQP YWAAAVVAAM IGQIGLPGGG ISYGHHYSSI GVPSTGFAGP GGFPRNLDAG 420
  421 MKPKWDNNDF NGYSRTIPVA RWIDCLLEPG KEINYNGGKV KLPDFKMMVI SGCNPWHHHQ 480
  481 DRNRMKQAFQ KLQTVVTIDF AWTATCRFSD IVLPACTQWE RNDIDVYGSY SSRGLIAMHR 540
  541 LVDPLFQSKP DFQIMKELTE RFGRSEEYSR GMSEMDWIRS LYNDCKKSNE GKFEMPEFDE 600
  601 FWEKSVLDFG QGQPWVRHAD FRQDPEINPL GTPSGFIEIT SRKIGRYGYE HCQEHPMWFE 660
  661 KSERSHGGPG SDKHPFWLQS CHPDKRLHSQ MCESEEFRAT YAVKGREPVY INPLDAKAKG 720
  721 IKEGDLVRVF NDRGQLLAGA VLTDSYPRGV IRIEEGAWYG PLSEKVGAIC TYGDPNTLTQ 780
  781 DIGSSELAQA TSANTCIVDF EKFTGKVPPV TSFGGPIEVA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle