YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254245253, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVRHKRKP VAEMNVVPYI DVMLVLLVIF MVTAPMLNQG VKVDLPKVSS EALPQDNNKQ  60
   61 VLTLSVKADG SYYWNVGSEV DTEKQTDSAV SLEQMTDAVT KIMSARPDTQ VFIRGDKAVN 120
  121 YGAVVGAMGA LQQAGVPNVG LITEAP

Type	Start	End	Confidence
Cytoplasmic	1	15	0.90
Transmembrane Helix	16	37	0.88
Non-Cytoplasmic	38	146	0.95