YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254245252, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNVVDHTS MWSLISNASI VVQLVMLTLV AASVTSWIMI FQRGNAMRAA KKALDAFEER  60
   61 FWSGIDLSKL YRQAGSNPDP DSGVEQIFRA GFKEFSRLRQ QPGVDPDAVM EGVARAMRVA 120
  121 ISREEEKLEA SLPFLATVGS TSPYVGLFGT VWGIMNSFRG LATVQQATLA TVAPGIAEAL 180
  181 IATAIGLFAA IPAVIAYNRF SARSEMLIGR YYTFADEFQA ILHRKVHTSD D

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.92
Transmembrane Helix	20	41	0.96
Cytoplasmic	42	131	0.98
Transmembrane Helix	132	154	0.88
Non-Cytoplasmic	155	175	0.87
Transmembrane Helix	176	197	0.91
Cytoplasmic	198	231	0.95