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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TNR8_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSILLKAAGL LFLGMLQAFP KDRPLDTTCT GDLSYYPGEA ARNCCYQCPS GLSPTQPCPQ  60
   61 GPATARNSVI LTTTSNEDGK CTACVTCLPG LVEKAPCSGN SPRICECQPG MYCSTPAVNS 120
  121 CARCSEKTVV KFPDTAEKNT ICELPSPGSG PNGSNPDDCK TLTSHTTPQA IPTLESPAND 180
  181 SVRSLLPKQV TDFVNEGATK LVKVPESSSS KASMPSPDPG NAEMNMTLKL PPPGTVPDIS 240
  241 TSENSMEPAS TASTLSLLVD ARTSSRMQPT SPLSTGTPFL DPGTMLFWVA MVVLLVGSAS 300
  301 FLLCYWKACW RRFQRKFHLN YLQQTFQPKM EQVDSCPTEK LTQLQRSGSV TDSSAGHTLS 360
  361 PLSPPAVETG ASVGTACLET LPLLDDSITG NSFAPREPPE PRVSTEHTNN RIEKIYIMKA 420
  421 DTAIVGSVKT EVPEGRAPVG STESELEAEL EVDHTPHYPE QETEPPLGSC TEVMFSVEEG 480
  481 GKEDHEPTTV SEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle