YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TNFL6_MACFA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQPFNYPYP QIYWVDSSAS SPWAPPGTVL PCPTSVPRRP GQRRPPPPPP PPPLPPPPPS  60
   61 PLPPLPLPPL KKRGNHSTGL CLLVMFFMVL VALVGLGLGM FQLFHLQKEL AELRESTSQK 120
  121 HTASSLEKQI GHPSPPPEKK EQRKVAHLTG KPNSRSMPLE WEDTYGIVLL SGVKYKKGGL 180
  181 VINETGLYFV YSKVYFRGQS CTNLPLSHKV YMRNSKYPQD LVMMEGKMMS YCTTGQMWAH 240
  241 SSYLGAVFNL TSADHLYVNV SELSLVNFEE SQTFFGLYKL

Type	Start	End	Confidence
Cytoplasmic	1	78	0.95
Transmembrane Helix	79	101	0.93
Non-Cytoplasmic	102	280	0.98