YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TNFL4_RABIT
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVRPLEEN VGNAPRPRFE RNKLLLVASV VQALGLLLCL TYVCQHSHAP EVSLQYPPIE  60
   61 NIMTQLQILT SHECEEDSFI LPLQKRDGTM EVQNNSVVIQ CDGFYLLSLK GYFSQEVSIS 120
  121 LHYRKGEEPF PILKKTKFAN SNVVLKLGYK DKVYLNVTTD SASCKQLSVN AGELIVILQN 180
  181 PGGYCAP

Type	Start	End	Confidence
Cytoplasmic	1	23	0.84
Transmembrane Helix	24	44	0.84
Non-Cytoplasmic	45	187	0.98