YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIMP1_HORSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPFAPLVSG ILLLLWLTAP SRACTCVPPH PQTAFCSSEF VIRAKFVGTS EVNQTTLQRR  60
   61 YEIKMTKMFK GFSALGDAPD TWFVYTPAME SLCGYFHRSE NRSEEFLIAG QLLDEKLYIT 120
  121 TCSFVAPWNS LSSAQRQGFT KTYAAGCGEC SVFPCSSIPC KLQSDTDCLW TDQLLTGSDK 180
  181 GFQSRYLACL PREPGLCTWQ SLRPRTA

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	207	0.99