YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIMP1_CANLF
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPFAPLASC ILLLLWVTAP SRACTCAPPH PQTALCNSQI VIRAKFVGTA EVNQTDLNRR  60
   61 YEIKMTKMFK GFSALGNASD IRFVDTPALE SVCGYLHRSQ NRSEEFLVAG NLRDGHLQIN 120
  121 TCSFVAPWSS LSTAQRRGFT KTYAAGCEGC TVFTCSSIPC KLQSDTHCLW TDHFLTGSDK 180
  181 GFQSRHLACL PREPGICTWQ SLRPRMA

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	207	0.99