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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TFR1_CRIGR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDQARSAIS NLFGGEPLSY TRFSLARQVD GDNSHVEMKL AVDEEENTDN NMKASVRKHR  60
   61 RLNGRLCFGT IAVVIFFLIG FMIGYLGYCK RTEQKDCVRL AETETGNSEI IQEENIPQSS 120
  121 RLYWADLKKL LSEKLDAIEF TDTIKQLSQT SREAGSQKDE NLAYYIENQF RDFKLSKVWR 180
  181 DEHYVKIQVK GSAAQNAVTI INVNGDSDLV ENPGGYVAYS KATTVSGKLI HANFGTKKDF 240
  241 EDLKYPVNGS LVIVRAGKIT FAEKVANAQS FNAIGVLIYM DQTKFPVVEA ELSLFGHAHL 300
  301 GTGDPYTPGF PSFNHTQFPP SQSSGLPSIP VQTISRKAAE KLFQNMETNC PPSWNTDSLC 360
  361 KLESSQGINV NLSVNNVLKE TRILNIFGVI KGFEEPDRYI VVGAQRDAWG PGAAKSSVGT 420
  421 GLLLKLAQAF SDMVSRGGFK PSRSIIFASW SAGDFGAVGA TEWLEGYLSS LHLKAFTYIN 480
  481 LDKVVLGTRN FKVSASPLLY TLIEKTMQDV RHPIDGKPLY RDSNWISKVE DLSLDNAAFP 540
  541 FLAYSGIPAV SFWFCENEDY PYLDTNLDTY EKLIQKVPQL NKMVRAAAEV AGQFIIKLTH 600
  601 DIELNLDYDM YNNKILSFVK ELNQFRADIK AMGLSLQWLY SARGDFFRAT SRLTTDFHNA 660
  661 EKTNRFVVRE INNRIMKVEY HFLSPYVSPR ESPFRHIFWG SGSHTLTALV ENLKLRQKNS 720
  721 SAFNETLFRN QLALATWTIQ GVANALSGDI WDIDNEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle